Package: LipidomicsR 0.3.6

Hengyu Zhu

LipidomicsR: Elegant Tools for Processing and Visualization of Lipidomics Data

An elegant tool for processing and visualizing lipidomics data generated by mass spectrometry. 'LipidomicsR' simplifies channel and replicate handling while providing thorough lipid species annotation. Its visualization capabilities encompass principal components analysis plots, heatmaps, volcano plots, and radar plots, enabling concise data summarization and quality assessment. Additionally, it can generate bar plots and line plots to visualize the abundance of each lipid species.

Authors:Mingshi Li [aut, com], Hengyu Zhu [aut, cre]

LipidomicsR_0.3.6.tar.gz
LipidomicsR_0.3.6.zip(r-4.5)LipidomicsR_0.3.6.zip(r-4.4)LipidomicsR_0.3.6.zip(r-4.3)
LipidomicsR_0.3.6.tgz(r-4.4-any)LipidomicsR_0.3.6.tgz(r-4.3-any)
LipidomicsR_0.3.6.tar.gz(r-4.5-noble)LipidomicsR_0.3.6.tar.gz(r-4.4-noble)
LipidomicsR_0.3.6.tgz(r-4.4-emscripten)LipidomicsR_0.3.6.tgz(r-4.3-emscripten)
LipidomicsR.pdf |LipidomicsR.html✨
LipidomicsR/json (API)

Peer review:

Bug tracker:https://github.com/mingshi1/lipidomicsr/issues

On CRAN:

19 exports 1.01 score 164 dependencies 1 scripts 166 downloads

Last updated 5 months agofrom:8efb7db17d. Checks:OK: 3 NOTE: 4. Indexed: yes.

Exports:abundance.lineplotabundance.plotabundance.signifabundance.summarychannel.deletedelRepFC_PgroupXpertheatmapimporternoridxnormalization_calculatorplotRadarQCplotreplicate.deletersd_calculatorsepclasstotal.abundancevolcano

Dependencies:abindaskpassbackportsbase64encbitbit64blobbootbroombslibcachemcallrcarcarDatacellrangerclassclicliprcodetoolscoincolorspaceconflictedcowplotcpp11crayoncurldata.tableDBIdbplyrDerivDescToolsdigestdoBydplyrdtplyre1071evaluateExactexpmfansifarverfastmapfmsbfontawesomeforcatsfsgarglegenericsggforceggiraphggplot2ggplotifyggrepelggscigldgluegoogledrivegooglesheets4gridGraphicsgtablehavenhighrhmshtmltoolshtmlwidgetshttrhttr2idsisobandjquerylibjsonliteknitrlabelinglatticelibcoinlifecyclelme4lmomlmtestlubridatemagrittrMASSMatrixMatrixModelsmatrixStatsmemoisemgcvmicrobenchmarkmimeminqamodelrmodeltoolsmultcompmultcompViewmunsellmvtnormnlmenloptrnnetnortestnumDerivopensslpbkrtestpheatmappillarpkgconfigplyrpolyclipprettyunitsprocessxprogressproxypspurrrquantregR6raggrappdirsRColorBrewerrcompanionRcppRcppEigenreadrreadxlrematchrematch2reprexreshape2rlangrmarkdownrootSolverstudioapirvestsandwichsassscalesselectrSparseMstringistringrsurvivalsyssystemfontstextshapingTH.datatibbletidyrtidyselecttidyversetimechangetinytextweenrtzdbutf8uuidvctrsviridisLitevroomwithrxfunxml2yamlyulab.utilszoo